Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX142860: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-90296' containing sample 'Aeromonas veronii AER39'
1 ILLUMINA (Illumina HiSeq 2000) run: 4.8M spots, 970.5M bases, 515.7Mb downloads

UUID: b32382b6-4539-4ee6-a0a4-ae2f4a67e12d

Design: 3-5kb jumps

Submitted by: Broad Institute (BI)

Study: Reference genome for the Human Microbiome Project

PRJNA71513 • SRP012255 • All experiments • All runs

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Reference genome for the Human Microbiome Project.

Sample: Generic sample from Aeromonas veronii AER39

SAMN00857870 • SRS309510 • All experiments • All runs

Organism: Aeromonas veronii AER39

Library:

Name: Solexa-90296

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 9 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 149751.0

library_type: IlluminaStufferlessJump

lsid: broadinstitute.org:bsp.prod.sample:2DYKE

material_type: DNA:DNA Somatic

project: G15609

root_sample_id: SM-29ALV

sample_id: SM-2DYKE

work_request: 29190

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2012-04-07 13:48:01.0	GAPipeline	RTA1.12.4.2	Sequencer Application 1.4.8

Runs: 1 run, 4.8M spots, 970.5M bases, 515.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR488160	4,804,326	970.5M	515.7Mb	2012-04-16

ID:: 172808

SRA

Sequence Read Archive

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